I stayed in the Duomo, the smaller and less expensive hotel associated with San Rufino. It was fine, although the room itself looked over a very loud restaurant, so the noise level was rather high.
The bathroom was extremely large, but as always in Italy, the toilet still had trouble flushing-- even after wasting gallons and gallons of water. The shower was good, with good pressure.
The hotel is close to San Rufino Plaza, where there are some restaurants and cafes. It is about 10-15 minutes from the Basilica of Saint Francis.
If you don't want to walk to the Hotel from the Assisi Train Station (which I don't recommend-- its much too far and steep), just take the bus and get off at the last stop at San Rufino. The hotel is only a few blocks from there.
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