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200 Townsend Ave Route 27, Boothbay Harbor, ME 04538-1838
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Free cancellation until 09/27/20
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Free cancellation until 09/28/20
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Free cancellation until 09/28/20
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Traveler (48)
Room & Suite (28)
Pool & Beach (8)
Certificate of Excellence


#6 of 12 hotels in Boothbay Harbor
Certificate of Excellence
GreenLeaders Platinum level
Welcome to the finest choice in Boothbay Harbor Maine accommodations. The Flagship Inn invites you to relax in some of the Boothbay Harbor Region's most comfortable and reasonable accommodations, all guaranteed by AAA and Mobil guide ratings. "Best Value" is how our guests describe us! We are locally owned and operated which allows us to offer the exceptional service of a small inn but the modern amenities of a chain hotel.
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Full view
Property amenities
Free parking
Free High Speed Internet (WiFi)
Free breakfast
Pets Allowed ( Dog / Pet Friendly )
Non-smoking hotel
Hot tub
Pool / beach towels
Outdoor pool
Heated pool
Breakfast buffet
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Room features
Air conditioning
Flatscreen TV
Room types
Non-smoking rooms
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Good to know
Centrally Located
665Reviews4Q+A100Room tips
Traveler rating
  • 333
  • 253
  • 64
  • 11
  • 4
Time of year
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Popular mentions
barbphoto wrote a review Jan 2020
1 contribution
Whenever we're heading to the Boothbay area, we always stay at Flagship. The place is clean, the staff is very friendly, the location is perfect, and the rates are reasonable. We highly recommend this place to all our friends.
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Date of stay: December 2019
Bill B wrote a review Jul 2019
49 contributions7 helpful votes
Hotel's Favorite
Family owned hotel with the special touches you don’t see at a regular hotel. Flowers everywhere. Very nice and neat and clean property. VERY good prices, .6 miles out of town. Heated salt water pool with towels provided at pool. Nice outdoor pool. Continental breakfast was in restaurant facility next door. Very nice. CLEAN and modern rooms. WiFi. Newer motel. Great customer service by desk and room cleaning services. Would definitely stay again.
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Date of stay: July 2019Trip type: Traveled with family
1 Helpful vote
Response from Donna G, Guest Relations Manager at Flagship Inn
Responded Jul 31, 2019
Thank you S1540GJbillb for taking the time to give us such a great review. We are pleased to hear that you enjoyed your stay with us and that you would stay with us again. We take pride that our property is always neat and clean and that our flowers are beautiful for our guests to enjoy. Take care and safe travels.
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GlobeTrotting387232 wrote a review Jan 2020
1 contribution
We chose this hotel because of it’s pet friendly status and it didn’t disappoint. The room was clean, stocked with items you would need. Comfortable and relaxing and friendly and helpful check in staff. Would stay here again!
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Date of stay: December 2019Trip type: Traveled on business
LizBlackman wrote a review Jan 2020
Kennebunk, Maine8 contributions1 helpful vote
We were so impressed with our entire experience! The check in was smooth and friendly. The room was spotlessly clean and very comfortable. The continental breakfast was fabulous-so much more than expected and the people working it were so very helpful, friendly and just wonderful. I highly recommend staying here if you need a great place in this area!!
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Date of stay: December 2019Trip type: Traveled with family
pilly1356 wrote a review Jan 2020
Topsham, Maine2 contributions
We've been staying here for years. It is a minute hop to all you want to do in Boothbay Harbor, but out of the crowds and bumper to bumper traffic. On special occasions we ask for the Jacuzzi room, but we have stayed in other rooms and always been happy. The place is super clean, the staff are friendly and the rates are reasonable no matter what the season. In Summer,enjoy their immaculate outdoor pool, in Winter, check out Gardens Aglow or see who's playing at the Boothbay Opera House. It is a great base of operations or destination for a getaway.
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Date of stay: December 2019
Sleep Quality
Room Tip: Jacuzzi tub room!
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$110 - $165 (Based on Average Rates for a Standard Room)
flagship hotel boothbay harbor, flagship boothbay harbor
United StatesMaineMid Coast MaineBoothbay Harbor
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Frequently Asked Questions about Flagship Inn
Which popular attractions are close to Flagship Inn?
Nearby attractions include Carousel Music Theater (0.05 miles), Dirty Bird Pottery (0.7 miles), and Opera House at Boothbay Harbor (0.5 miles).
What are some of the property amenities at Flagship Inn?
Some of the more popular amenities offered include free wifi, free breakfast, and a pool.
Which room amenities are available at Flagship Inn?
Top room amenities include a kitchenette, air conditioning, and a flat screen TV.
What food & drink options are available at Flagship Inn?
Guests can enjoy free breakfast during their stay.
Is parking available at Flagship Inn?
Yes, free parking is available to guests.
What are some restaurants close to Flagship Inn?
Conveniently located restaurants include Ice Cream Factory, Shannon's Unshelled, and The Thistle Inn Restaurant.
Are there opportunities to exercise at Flagship Inn?
Yes, guests have access to a pool during their stay.
Is Flagship Inn located near the city center?
Yes, it is 0.7 miles away from the center of Boothbay Harbor.
Are pets allowed at Flagship Inn?
Yes, pets are typically allowed, but it's always best to call ahead to confirm.
Are there any historical sites close to Flagship Inn?
Many travelers enjoy visiting The Wilson Memorial Chapel (3.5 miles).
Is Flagship Inn accessible?
Yes, it offers wheelchair access, reduced mobility rooms, and facilities for disabled guests. For specific inquiries, we recommend calling ahead to confirm.